Discovered motifs

148 potential motifs are identified by analysing thousands of small RNA SRA sequencing samples

For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net.

If you use DREME in your research please cite the following paper:
Timothy L. Bailey, “DREME: Motif discovery in transcription factor ChIP-seq data”, Bioinformatics, 27(12):1653-1659, 2011. [full text]

Discovered Motifs

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Click on the ↧ under the More column to show more information about the motif.
Click on the ⇢ under the Submit column to send the motif to another MEME suite program. Eg. Tomtom
Click on the ⟱ under the Download column to get the position weight matrix of a motif or to download the logo image with your chosen options.

  Motif
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E-value
Unerased E-value
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1. CAGYCCGAC 1.2e-375 1.2e-375
2. CATACGARA 4.0e-127 4.0e-127
3. TAGAACTCW 1.2e-126 1.2e-126
4. TCCAGAGTB 5.2e-120 1.2e-118
5. TCCTAAMCA 1.6e-104 1.6e-104
6. CMTCAGATC 4.0e-098 4.0e-098
7. GCCGCSGCC 5.9e-085 5.9e-085
8. CATTATTVC 2.8e-084 2.8e-084
9. AACATCHGT 2.7e-077 2.7e-077
10. GGATAAGKA 9.3e-071 4.7e-071
11. CAAGTTMGG 3.7e-082 3.7e-082
12. AGAAGACGG 1.6e-058 1.6e-058
13. GTMCCGTGA 6.7e-058 6.7e-058
14. CCCDGCTCGC 2.1e-056 2.1e-056
15. CTTAGCGGW 2.9e-053 2.9e-053
16. AACCCAGCW 5.3e-063 3.5e-068
17. CGWACAGCA 2.8e-053 2.8e-053
18. ATCYACGGG 5.3e-049 5.3e-049
19. CDGACTGTAG 4.8e-042 9.4e-284
20. ACAATSTAG 7.8e-042 7.8e-042